Publications 2018

Publications in which OIC equipment was used

  1. Amin M, Bagheri M, Mansourian M, Jaafari MR & ten Hagen T (2018) Regulation of in vivo behavior of TAT-modified liposome by associated protein corona and avidity to tumor cells. International journal of nanomedicine 13: 7441-7455.
  2. Badura A, Verpeut JL, Metzger JW, Pereira TD, Pisano TJ, Deverett B, Bakshinskaya DE & Wang SS-H (2018) Normal cognitive and social development require posterior cerebellar activity. eLife 7.
  3. Barakat TS, Halbritter F, Zhang M, Rendeiro AF, Perenthaler E, de Bock G & Chambers I (2018) Functional Dissection of the Enhancer Repertoire in Human Embryonic Stem Cells. Cell Stem Cell.
  4. Brandt M, Van Dijk CGM, Chrifi I, et al. (2018) Endothelial loss of Fzd5 stimulates PKC/Ets1-mediated transcription of Angpt2 and Flt1. Angiogenesis 1-17.
  5. Carofiglio F, Sleddens-Linkels E, Wassenaar E, Inagaki A, van Cappellen G, Grootegoed A, Toth A & Baarends W (2018) Repair of exogenous DNA double-strand breaks promotes chromosome synapsis in SPO11-mutant mouse meiocytes, and is altered in the absence of HORMAD1. D N A Repair 63: 25-38.
  6. Castillam C, Maskam M, Sorokin DV, Meijering E & Ortiz-De-Solorzano C (2018) Three-Dimensional Quantification of Filopodia in Motile Cancer Cells. IEEE Transactions on Medical Imaging.
  7. Chrifi I, Louzao-Martinez L, Brandt M, Van Dijk CGM, Bürgisser P, Zhu C, Kros J, Verhaar M, Duncker D & Cheng C (2018) CMTM4 regulates angiogenesis by promoting cell surface recycling of VE-cadherin to endothelial adherens junctions. Angiogenesis.
  8. de Pater E & Trompouki E (2018) Bloody zebrafish: Novel methods in normal and malignant hematopoiesis. Frontiers in Cell and Developmental Biology 6.
  9. Eich C, Arlt J, Vink C, Solaimani Kartalaei P, Kaimakis P, Mariani SA, Linden R, van Cappellen G & Dzierzak E (2018) In vivo single cell analysis reveals Gata2 dynamics in cells transitioning to hematopoietic fate. The Journal of Experimental Medicine 215: 233-248.
  10. Enguita-Marruedo A, van Cappellen G, Hoogerbrugge J, Carofiglio F, Wassenaar E, Slotman JA, Houtsmuller A & Baarends W (2018) Live cell analyses of synaptonemal complex dynamics and chromosome movements in cultured mouse testis tubules and embryonic ovaries. Chromosoma: biology of the nucleus 1-19.
  11. Ezra-Nevo G, Prestori F, Locatelli F, et al. (2018) Cerebellar learning properties are modulated by the CRF receptor. The Journal of Neuroscience 38: 6751-6765.
  12. Fahmy-Garcia S, Mumcuoglu D, de Miguel L, et al. (2018) Novel In Situ Gelling Hydrogels Loaded with Recombinant Collagen Peptide Microspheres as a Slow-Release System Induce Ectopic Bone Formation. Advanced Healthcare Materials.
  13. Farshadi E, Yan J, Leclere P, Goldbeter A, Chaves I & van der Horst G (2018) The positive circadian regulators CLOCK and BMAL1 control G2/M cell cycle transition through Cyclin B1. Cell Cycle.
  14. Galliano E, Schonewille M, Peter S, Rutteman M, Houtman S, Jaarsma D, Hoebeek F & de Zeeuw C (2018) Impact of NMDA receptor overexpression on cerebellar purkinje cell activity and motor learning. eNeuro 5.
  15. Gontan C, Mira-Bontenbal H, Magaraki A, Dupont C, Barakat TS, Rentmeester E, Demmers J & Gribnau J (2018) REX1 is the critical target of RNF12 in imprinted X chromosome inactivation in mice. Nature Communications 9.
  16. Gornati S, Schafer C, Eelkman Rooda O, Nigg A, de Zeeuw C & Hoebeek F (2018) Differentiating Cerebellar Impact on Thalamic Nuclei. Cell Reports.
  17. Güzel C, Bosman-van den Berg C, Duvekot H, Stingl C, van den Bosch TPP, van der Weiden M, Steegers E, Steegers-Theunissen RPM & Luider T (2018) Quantification of Calcyclin and Heat Shock Protein 90 in Sera from Women with and without Preeclampsia by Mass Spectrometry. Proteomics – Clinical Applications.
  18. Hakim MS, Ding S, Chen S, Yin Y, Su J, van der Woude J, Fuhler G, Peppelenbosch M, Pan Q & Wang W (2018) TNF-α exerts potent anti-rotavirus effects via the activation of classical NF-κB pathway. Virus Research 253: 28-37.
  19. Hoppenbrouwers T, Boeddha N, Ekinci E, Emonts M, Hazelzet J, Driessen G & de Maat M (2018) Neutrophil Extracellular Traps in Children with Meningococcal Sepsis. Pediatric Critical Care Medicine 19: e286-e291.
  20. Hoppenbrouwers T, Sultan A, Abraham T, Lemmens-den Toom N, Maňásková SH, van Cappellen G, Houtsmuller A, van Wamel W, de Maat M & van Neck H (2018) Staphylococcal protein a is a key factor in neutrophil extracellular traps formation. Frontiers in Immunology 9.
  21. Jaarsma D, Blot FGC, Wu B, Venkatesan S, Voogd J, Meijer D, Ruigrok T, Gao Z, Schonewille M & de Zeeuw C (2018) The basal interstitial nucleus (BIN) of the cerebellum provides diffuse ascending inhibitory input to the floccular granule cell layer. The Journal of Comparative Neurology.
  22. Kolijn K, Verhoef E, Smid M, Böttcher R, Jenster G, Debets R & Leenders G (2018) Epithelial–mesenchymal transition in human prostate cancer demonstrates enhanced immune evasion marked by IDO1 expression. Cancer Research 78: 4671-4679.
  23. Kouwenberg JJM, Kremers GJ, Slotman JA, Wolterbeek HT, Houtsmuller AB, Denkova AG & Bos AJJ (2018) Alpha particle spectroscopy using FNTD and SIM super-resolution microscopy. J Microsc 270: 326-334.
  24. La Distia Nora R, Walburg KV, van Hagen M, Swagemakers S, van der Spek P, Quinten C, van Velthoven M, Ottenhoff T, Dik W & Haks M (2018) Retinal pigment epithelial cells control early Mycobacterium tuberculosis infection via interferon signaling. Investigative Ophthalmology & Visual Science 59: 1384-1395.
  25. Lattwein K, Shekhar H, van Wamel W, Gonzalez T, Herr AB, Holland CK & Kooiman K (2018) An in vitro proof-of-principle study of sonobactericide. Scientific Reports 8.
  26. Lokerse W, Eggermont AMM, Grüll H & Koning G (2018) Development and evaluation of an isolated limb infusion model for investigation of drug delivery kinetics to solid tumors by thermosensitive liposomes and hyperthermia. Journal of Controlled Release 270: 282-289.
  27. Ma X-X, Ma Z & Pan Q (2018) The Challenges of Long-Term Transcriptional Gene Silencing by RNA Viruses. Trends in Biochemical Sciences 43: 649-650.
  28. Maat-Kievit A, Tessadori F, Douben H, et al. (2018) Variants in members of the cadherin–catenin complex, CDH1 and CTNND1, cause blepharocheilodontic syndrome. European Journal of Human Genetics 1-10.
  29. Mandemaker IK, Geijer ME, Kik I, et al. (2018) DNA damage-induced replication stress results in PA200-proteasome-mediated degradation of acetylated histones. EMBO Rep 19.
  30. Mata G, Radojević M, Fernandez-Lozano C, Smal I, Werij N, Morales M, Meijering E & Rubio J (2018) Automated Neuron Detection in High-Content Fluorescence Microscopy Images Using Machine Learning. Neuroinformatics.
  31. Menoni H, Wienholz F, Theil A, Janssens R, Lans H, Campalans A, Radicella P, Marteijn J & Vermeulen W (2018) The transcription-coupled DNA repair-initiating protein CSB promotes XRCC1 recruitment to oxidative DNA damage. Nucleic Acids Research 46: 7747-7756.
  32. Milanese C, Cerri S, Ulusoy A, Gornati S, Plat A, Gabriels S, Blandini F, Di Monte DA, Hoeijmakers J & Mastroberardino P (2018) Activation of the DNA damage response in vivo in synucleinopathy models of Parkinson’s disease. Cell Death and Disease 9.
  33. Milanese C, Tapias V, Gabriels S, et al. (2018) Mitochondrial Complex i Reversible S-Nitrosation Improves Bioenergetics and Is Protective in Parkinson’s Disease. Antioxidants & Redox Signaling 28: 44-61.
  34. Mustafa D, Pedrosa RMSM, Smid M, et al. (2018) T lymphocytes facilitate brain metastasis of breast cancer by inducing Guanylate-Binding Protein 1 expression. Acta Neuropathologica 1-19.
  35. Oosterhof N, Kuil L, van der Linde H, Burm SM, Berdowski W, van IJcken W, van Swieten J, Hol E, Verheijen MHG & van Ham T (2018) Colony-Stimulating Factor 1 Receptor (CSF1R) Regulates Microglia Density and Distribution, but Not Microglia Differentiation In Vivo. Cell Reports 24: 1203-1217.e1206.
  36. Ouwendijk W, van Veen S, Mehraban T, Mahalingam R & Verjans G (2018) Simian varicella virus infects enteric neurons and α4β7 integrin-expressing gut-tropic T-cells in nonhuman primates. Viruses 10.
  37. Peng W, de Bruijn R, Farrell E, Sioud M, Mashayekhi V, Oliveira S, van Dam G, Roodenburg JLN, Witjes M & Robinson D (2018) Epidermal growth factor receptor (EGFR) density may not be the only determinant for the efficacy of EGFR-targeted photoimmunotherapy in human head and neck cancer cell lines. Lasers in Surgery and Medicine 50: 513-522.
  38. Prekovic S, van den Broeck T, Linder S, van Royen ME, Houtsmuller AB, Handle F, Joniau S, Zwart W & Claessens F (2018) Molecular underpinnings of enzalutamide resistance. Endocr Relat Cancer 25: R545-R557.
  39. Proietti Onori M, Koopal B, Everman DB, et al. (2018) The intellectual disability-associated CAMK2G p.Arg292Pro mutation acts as a pathogenic gain-of-function. Human Mutation.
  40. Radojević M & Meijering E (2018) Automated Neuron Reconstruction from 3D Fluorescence Microscopy Images Using Sequential Monte Carlo Estimation. Neuroinformatics.
  41. Ribeiro-Silva C, Aydin OZ, Mesquita-Ribeiro R, Slyskova J, Helfricht A, Marteijn JA, Hoeijmakers JHJ, Lans H & Vermeulen W (2018) DNA damage sensitivity of SWI/SNF-deficient cells depends on TFIIH subunit p62/GTF2H1. Nat Commun 9: 4067.
  42. Rotaru DC, van Woerden G, Wallaard I & Elgersma Y (2018) Adult Ube3a gene reinstatement restores the electrophysiological deficits of prefrontal cortex layer 5 neurons in a mouse model of angelman syndrome. The Journal of Neuroscience 38: 8011-8030.
  43. Rousian M, Koster MPH, Mulders A, Koning A, Steegers-Theunissen R & Steegers E (2018) Virtual reality imaging techniques in the study of embryonic and early placental health. Placenta.
  44. Sabatella M, Theil A, Ribeiro-Silva C, Slyskova J, Thijssen K, Voskamp C, Lans H & Vermeulen W (2018) Repair protein persistence at DNA lesions characterizes XPF defect with Cockayne syndrome features. Nucleic Acids Research 46: 9563-9577.
  45. Saffari TM, Schüttenhelm B, van Neck H & Holstege JC (2018) Nerve reinnervation and itch behavior in a rat burn wound model. Wound Repair and Regeneration 26: 16-26.
  46. Schmitt M, Schewe M, Sacchetti A, et al. (2018) Paneth Cells Respond to Inflammation and Contribute to Tissue Regeneration by Acquiring Stem-like Features through SCF/c-Kit Signaling. Cell Reports.
  47. Seynhaeve A, Oostinga D, van Haperen R, Eilken HM, Adams S, Adams RH & ten Hagen T (2018) Spatiotemporal endothelial cell-pericyte association in tumors as shown by high resolution 4D intravital imaging. Scientific Reports 8.
  48. Sideras K, Galjart B, Vasaturo A, et al. (2018) Prognostic value of intra-tumoral CD8(+) /FoxP3(+) lymphocyte ratio in patients with resected colorectal cancer liver metastasis. J Surg Oncol 118: 68-76.
  49. Sivasubramaniyan K, Ilas DC, Harichandan A, et al. (2018) Bone Marrow-Harvesting Technique Influences Functional Heterogeneity of Mesenchymal Stem/Stromal Cells and Cartilage Regeneration. American Journal of Sports Medicine 46: 3521-3531.
  50. Slyskova J, Sabatella M, Ribeiro-Silva C, Stok C, Theil A, Vermeulen W & Lans H (2018) Base and nucleotide excision repair facilitate resolution of platinum drugs-induced transcription blockage. Nucleic Acids Research 46: 9537-9549.
  51. Steurer B, Janssens RC, Geverts B, et al. (2018) Live-cell analysis of endogenous GFP-RPB1 uncovers rapid turnover of initiating and promoter-paused RNA Polymerase II. Proc Natl Acad Sci U S A 115: E4368-E4376.
  52. van den Bogaard EHJ, van Geel M, van Vlijmen-Willems IMJJ, et al. (2018) Deficiency of the human cysteine protease inhibitor cystatin M/E causes hypotrichosis and dry skin. Genetics in Medicine.
  53. van den Tempel N, Naipal KAT, Raams A, van Gent D, Franckena M, Boormans J & Kanaar R (2018) Ex vivo assays to predict enhanced chemosensitization by hyperthermia in urothelial cancer of the bladder. PLoS ONE 13.
  54. van der Pluijm I, Burger J, van Heijningen P, et al. (2018) Decreased mitochondrial respiration in aneurysmal aortas of Fibulin-4 mutant mice is linked to PGC1A regulation. Cardiovascular Research 114: 1776-1793.
  55. van der Wal E, Herrero-Hernandez P, Wan R, et al. (2018) Large-Scale Expansion of Human iPSC-Derived Skeletal Muscle Cells for Disease Modeling and Cell-Based Therapeutic Strategies. Stem Cell Reports.
  56. van der Wijst J, Tutakhel O, Bos C, Danser J, Hoorn E, Hoenderop J & Bindels R (2018) Effects of a high-sodium/low-potassium diet on renal calcium, magnesium, and phosphate handling. American Journal of Physiology – Renal Fluid and Electrolyte Physiology 315: F110-F122.
  57. Wang T, van Woerden G, Elgersma Y & Borst J (2018) Enhanced transmission at the calyx of held synapse in a mouse model for angelman syndrome. Frontiers in cellular neuroscience 11.
  58. Zhang W, van Weerden W, de Ridder C, Erkens-Schulze S, Schönfeld E, Meijer TG, Kanaar R, van Gent D & Nonnekens J (2018) Ex vivo treatment of prostate tumor tissue recapitulates in vivo therapy response. The Prostate.
  59. Zhu C, Mustafa D, Krebber MM, Chrifi I, Leenen P, Duncker D, Dekker L, Luider T, Kros J & Cheng C (2018) Comparative proteomic analysis of cat eye syndrome critical region protein 1-function in tumor-associated macrophages and immune response regulation of glial tumors. Oncotarget 9: 33500-33514.